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Bioinformatics
Bio-informatic support:
External links: CMFdb MIAME MeV IGV Ingenuity Nexus eArray
Internal links: FeatureExtraction6 ImageArchive Tiffsplitter Imagene
We aim to support users of the facility throughout the processes of data acquisition, data analysis and data storage. Application and development of Sequencing Analysis software is one of the main points of interest, however we are also improving the central database CMFdb for the latest improvements and the addition of the direct Illumina MIAME upload to ArrayExpress.
Click here for more information on how RNAseq is used for Gene Expression Profiling analysis.
Central microarray database (CMFdb) information
MIAME compliancy and upload of data to ArrayExpress at EBI
Multi Experiment Viewer (MEV) information
Sequence data viewers
Sequence data format